BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C05SP1|AL426492
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig550 1612 0.0
>3x_Contig550
Length = 2221
Score = 1612 bits (813), Expect = 0.0
Identities = 830/833 (99%), Gaps = 2/833 (0%)
Strand = Plus / Minus
Query: 1 gatcttgtcaattctcaaattcgtagttatttctcacactgtatagccttatgcaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gatcttgtcaattctcaaattcgtagttatttctcacactgtatagccttatgcaatttt 792
Query: 61 tgaagcttaactatattttattaatatcacgtggatttgtataccttttttatatcaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tgaagcttaactatattttattaatatcacgtggatttgtataccttttttatatcaaag 732
Query: 121 cccttgttaacactggaatacacactgagtttgagatgaaaacaattacttacttatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cccttgttaacactggaatacacactgagtttgagatgaaaacaattacttacttatgat 672
Query: 181 tcaatttgataaaataaaccaataaaatggagtataaaatcaggaaaagtgtatgtacga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tcaatttgataaaataaaccaataaaatggagtataaaatcaggaaaagtgtatgtacga 612
Query: 241 aggcgtaacggagaattgaccccgagattattgtagttctgctcaaaagagtatttaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aggcgtaacggagaattgaccccgagattattgtagttctgctcaaaagagtatttaacc 552
Query: 301 tctgaagtcccctatttcaataaatgaaataaggagtaccttacaattaatagcgcttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tctgaagtcccctatttcaataaatgaaataaggagtaccttacaattaatagcgcttcc 492
Query: 361 aaacttttgatacacagaaacgaaaaatgctccaattgagccataaactagacggaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaacttttgatacacagaaacgaaaaatgctccaattgagccataaactagacggaagac 432
Query: 421 atatcttgttagtgggatgcggtgaagtaggatataccagagtgttgaaacttttaccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atatcttgttagtgggatgcggtgaagtaggatataccagagtgttgaaacttttaccga 372
Query: 481 caggatgtaaactaacaattatatccccagaaatccatcccaaattaacagatctagtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caggatgtaaactaacaattatatccccagaaatccatcccaaattaacagatctagtca 312
Query: 541 ataacgatcaatatcaaccaggccagatctacaagtatttggcgaggaactttgaagaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ataacgatcaatatcaaccaggccagatctacaagtatttggcgaggaactttgaagaag 252
Query: 601 atgatttggtgatgtacggtaacaatcaagtaagtgaagttgaagatttgaataaaccgc 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 251 atgatttggtgatgtacggtaacaatcaagtaagtaaagttgaagatttgaataaaccgc 192
Query: 661 ta-gatttcatatggttttcacttgtcttccggatctaaaattgagcactcgtatttacc 719
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 taggatttcatatggttttcacttgtcttccggatctaaaattgagcactcgtatttacc 132
Query: 720 agttgacaaaattgaaacttggcatgggtactttatgcaacgttgcagaccaaccaccat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 agttgacaaaattgaaacttggcatgggtactttatgcaacgttgcagaccaaccaccat 72
Query: 780 tatgtgatttttattttggagcaaatctcaggctaggagatgaaaatttcggt 832
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatgt-atttttattttggagcaaatctcaggctaggagatgaaaatttcggt 20
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7414
Number of Sequences: 1807
Number of extensions: 7414
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)